This project will work on improving the nf-core/sarek pipeline with a focus on maintenance like:

  • Add nf-tests to subworkflows
  • Improve input validation
  • Improve documentation
  • Update modules to latest tool version (sentieon, gatk,…)
  • New additions welcome!

Goals

Improve sarek stability.

Sarek Logo bouncing up and down.
category
pipelines
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