This project aims to update the nf-core/proteinfamilies pipeline to work towards release 1.1.0.

Goals

  • Creating nf-tests for local modules.
    • For anyone interested. Beginners welcome!
  • Creating nf-tests for local subworkflows.
    • For people with some experience in Nextflow/nf-core pipelines.
  • Replace SeqIO with pyfastx in custom python scripts and benchmark
    • For people with some experience in Nextflow/nf-core pipelines.

We welcome contributors of all experience levels.

category
pipelines